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Dr.-Ing. Dženan Zukić

address: 

Universität Siegen
Lehrstuhl für Computergrafik
57076 Siegen

About myself

Name pronounciation

IPA: ʤɛnan zukiʨ. Bosnian Latin: Dženan Zukić. Bosnian Cyrillic: Џенан Зукић.
If using English writing rules, there is more than one possible way to write my name. The most logical one is: Janan Zookich. German rules: Dschenan Sukitsch. Since my first name has Arabic origin, it can be written in Arabic too: جنان.

Less important matters :)

I was born in Sarajevo (in a country that was called Yugoslavia at that time) on 30th October 1983. Ten years later that country broke up in a bloody war (is there a war that is not bloody?). The hardest hit was Bosnia. My family estate happened to be on the front line, and was completely destroyed, along with much of the country's infrastructure.
The country still feels the consequences in many areas, with higher education being one of them. After graduating from Electrical Engineering Faculty, University of Sarajevo, I looked for a higher quality post-graduate education abroad (although the situation was rapidly improving, I could not wait). The country of my choice was Germany, because I learned German language in high-school. Furthermore, Siegen was one of the rare cities that offered a program in English (that was important, because I do not speak German well, even now).

Spine dataset

On 8th October 2010 I had an MRI scan of my lower spine. The datasets are here.

Research stay @ Harvard's SPL

I am visiting Surgical Planning Laboratory, part of Brigham and Women's Hospital, in period January - March 2013. A bit more info: http://www.spl.harvard.edu/pages/People/dzenanz



2014

Articles/Journal Papers

[bib] - Dženan Zukić, Aleš Vlasák, Jan Egger, Daniel Hořínek, Christopher Nimsky, Andreas Kolb - Robust Detection and Segmentation for Diagnosis of Vertebral Diseases using Routine MR Images
In Computer Graphics Forum (Invited Paper), 33(6), 2014, pages 190-204 - [pdf]

PhD Thesis

[bib] - Dzenan Zukic - An Efficient Inflation Method for Segmentation of Medical 3D Images
In Phd Thesis, Computer Graphics Group, University of Siegen, 2014 - [pdf]

2013

Articles/Journal Papers

[bib] - Jan Egger, Dženan Zukić, Bernd Freisleben, Andreas Kolb, Christopher Nimsky - Segmentation of Pituitary Adenoma: A Graph-based Method vs. a Balloon Inflation Method
In Computer Methods and Programs in Biomedicine, 110(3), 2013, pages 268-278 - [pdf]

2012

Articles/Journal Papers

[bib] - Jan Egger, Tina Kapur, Thomas Dukatz, Malgorzata Kolodziej, Dženan Zukić, Bernd Freisleben, Christopher Nimsky - Square-Cut: A Segmentation Algorithm on the Basis of a Rectangle Shape
In PLoS ONE, 7(2), 2012, pages e31064 - [pdf]

Conference Papers

[bib] - Dženan Zukić, Aleš Vlasák, Thomas Dukatz, Jan Egger, Daniel Hořínek, Christopher Nimsky, Andreas Kolb - Segmentation of Vertebral Bodies in MR Images
In Vision, Modeling and Visualization, Eurographics, 2012, pages 135-142 - [pdf]

2011

Conference Papers

[bib] - Dženan Zukić, Jan Egger, Miriam H. A. Bauer, Daniela Kuhnt, Barbara Carl, Bernd Freisleben, Andreas Kolb, Christopher Nimsky - Preoperative Volume Determination for Pituitary Adenoma
In Proc. SPIE Medical Imaging, SPIE, 7963(1), 2011, pages 79632T - [pdf]

2010

Conference Papers

[bib] - Dženan Zukić, Jan Egger, Miriam H. A. Bauer, Daniela Kuhnt, Barbara Carl, Bernd Freisleben, Andreas Kolb, Christopher Nimsky - Glioblastoma Multiforme Segmentation in MRI Data with a Balloon Inflation Approach
In Proc. of the 6th Russian-Bavarian Conference on Bio-Medical Engineering, 2010, pages 40-44 - [pdf]
[bib] - Jan Egger, Dženan Zukić, Miriam H. A. Bauer, Daniela Kuhnt, Barbara Carl, Bernd Freisleben, Andreas Kolb, Christopher Nimsky - A Comparison of Two Human Brain Tumor Segmentation Methods for MRI Data
In Prof. of the 6th Russian-Bavarian Conference on Bio-Medical Engineering, 2010, pages 9-13 - [pdf]

2009

Book Chapters

[bib] - Dženan Zukić, Christof Rezk-Salama, Andreas Kolb - Classifying Volume Datasets Based on Intensities and Geometric Features
In Intelligent Computer Graphics 2009, Springer, 2009, pages 63-85 - [pdf]

Conference Papers

[bib] - Dženan Zukić, Christof Rezk-Salama, Andreas Kolb - A Neural Network Classifier of Volume Datasets
In Proc. Int. Conf. on Computer Graphics and Artificial Intelligence, New Technologies Publications, 2009, pages 53-62 - [pdf]

2008

Conference Papers

[bib] - Dženan Zukić, Andreas Elsner, Zikrija Avdagić, Gitta Domik - Neural networks in 3D medical scan visualization
In Int. Conf. on Computer Graphics and Artificial Intelligence (3IA 2008), Technological Educational Institute of Athens, 2008, pages 183-190 - [pdf]

2007

Technical Reports

[bib] - Andreas Elsner, Dženan Zukić, Gitta Domik, Zikrija Avdagić, Wilhelm Schäfer, Eva Fricke, Dušanka Bošković - Semiautomatic Cardiac CT Scan Classification with a Semantic User Interface
In Technical Report Online Report, University of Paderborn, 2007
 - [pdf]

Master Thesis

[bib] - Dženan Zukic - Neuronske mreže u vizuelizaciji CT snimaka
In Master Thesis, University of Sarajevo, Faculty of Electrical Engineering, Department of Computer Science, 2007 - [pdf]